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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs58420070 chr8:11789894 C/T SGK223 chr8:8175258-8244008:- 0.36 6.58 1.25E-10 Box Plot
THCA rs584300 chr17:18288199 C/T LOC162632 chr17:16614993-16707819:+ 0.46 8.02 8.27E-15 Box Plot
THCA rs58430343 chr2:132196645 T/C CCDC74B chr2:130896860-130902707:- 0.37 6.55 1.49E-10 Box Plot
THCA rs5844127 chr21:43991916 C/CTCA TLN1 chr9:35696945-35732392:- 0.21 5.89 7.43E-9 Box Plot
THCA rs5844128 chr21:43997321 CA/C TLN1 chr9:35696945-35732392:- 0.22 6.14 1.74E-9 Box Plot
THCA rs584732 chr11:77574605 C/T INTS4L1 chr7:64601603-64694600:+ 0.43 7.73 6.2E-14 Box Plot
THCA rs58476925 chr22:24046311 C/A IGLL3 chr22:25713888-25716191:+ 0.69 9.85 5.85E-21 Box Plot
THCA rs585172 chr11:77574697 T/A INTS4L1 chr7:64601603-64694600:+ 0.43 7.73 6.2E-14 Box Plot
THCA rs5852461 chr3:125770291 CG/C ROPN1 chr3:123687368-123711025:- 0.34 6.17 1.47E-9 Box Plot
THCA rs5852467 chr3:125779530 T/TG ROPN1 chr3:123687368-123711025:- 0.33 6.17 1.42E-9 Box Plot
THCA rs58556886 chr8:11784327 G/A SGK223 chr8:8175258-8244008:- -0.44 -8.14 3.56E-15 Box Plot
THCA rs58561844 chr8:11789664 A/G SGK223 chr8:8175258-8244008:- -0.45 -8.44 3.94E-16 Box Plot
THCA rs58567238 chr20:15176913 G/GA MACROD2 chr20:13976015-16033842:+ 0.65 10.04 1.22E-21 Box Plot
THCA rs585721 chr11:77553638 T/C INTS4L1 chr7:64601603-64694600:+ 0.44 8.02 8.38E-15 Box Plot
THCA rs58602899 chr8:11848833 G/T SGK223 chr8:8175258-8244008:- -0.44 -8.59 1.19E-16 Box Plot